PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.85INT
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 198aa    MW: 21446.1 Da    PI: 9.1862
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.85INTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.3e-1177124455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Aradu.85INT  77 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 124
                  8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.74E-1071128No hitNo description
SuperFamilySSF474593.27E-1871142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-1973145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.82873123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-877124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-1079129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
NDSYGNKHRK LEGSFQEENR AGDSKAEVGA SLVAGNKLAR QGGGGGGGGG AAKPSCEQPP  60
KQDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV PGCNKVIGKA LVLDEIINYI  120
QSLQRQVEFL SMKLEAVNSR LNMNSVVECF PSKDVQVGNQ PFDIAGMIFG SQATRGYAQG  180
SQSGWLHMQL GGDFDRVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015970009.11e-146PREDICTED: transcription factor bHLH79
SwissprotQ9LV177e-58BH079_ARATH; Transcription factor bHLH79
TrEMBLA0A0B2QES44e-93A0A0B2QES4_GLYSO; Transcription factor bHLH79
TrEMBLI1MTN24e-93I1MTN2_SOYBN; BHLH transcription factor
STRINGGLYMA17G10290.11e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-69BIG PETAL P